Publications

Special Issue on Software Tools and Resources: Acknowledging the Toolmakers of Science.

Weintraub, ST. et al. (2019). J Proteome Res. 18, 575.

PMID: 30704244

PaDuA: A Python Library for High-Throughput (Phospho)proteomics Data Analysis.

Ressa, A. et al. (2019). J Proteome Res. 18, 576-584.

PMID: 30525654

Presence of Genetic Variants Among Young Men With COVID-19.

Van der Made, Cl. (2020). JAMA.

PMID: 32706371

Mutational signature in colorectal cancer caused by genotoxic pks + E. coli.

Pleguezuelos-Manzano, C. et al. (2020). Nature.

PMID: 32106218

SARS-CoV-2 productively infects human gut enterocytes.

Lamers, MM. et al. (2020). Science.

PMID: 32358202

Reproducibility of Targeted Lipidome Analyses (Lipidyzer) in Plasma and Erythrocytes over a 6-Week Period

Loef, M. et al. (2020). Metabolites.

PMID: 33396510

Inhibition of ∆24-dehydrocholesterol reductase activates pro-resolving lipid mediator biosynthesis and inflammation resolution.

Körner, A. et al. (2019). Proc Natl Acad Sci U S A. 116, 20623 – 20634.

PMID: 31548397

Cholesterol Metabolism Is a Druggable Axis that Independently Regulates Tau and Amyloid-β in iPSC-Derived Alzheimer’s Disease Neurons.

van der Kant, R. et al. (2019). Cell Stem Cell. 24, 363-275.

PMID: 30686764

Fast LC-ESI-MS/MS analysis and influence of sampling conditions for gut metabolites in plasma and serum.

van der Laan, T. et al. (2019). Sci Rep. 9, 12370.

PMID: 31451722

High-Resolution mRNA and Secretome Atlas of Human Enteroendocrine Cells.

Beumer, J. et al. (2020). Cell.

PMID: 32407674

Metabolic changes related to the IDH1 mutation in gliomas preserve TCA-cycle activity: An investigation at the protein level.

Dekker, LJM. et al. (2020). FASEB J. 34, 3646 – 3657.

PMID: 31960518

SARS-CoV-2 productively infects human gut enterocytes.

Lamers, MM. et al. (2020). Science.

PMID: 32358202

Integrating Serum Protein Electrophoresis with Mass Spectrometry, A New Workflow for M-Protein Detection and Quantification.

Zajec, M. et al. (2020). J Proteome Res.

PMID: 31895568

Highly sensitive CE-ESI-MS analysis of N-glycans from complex biological samples.

Lageveen-Kammeijer, GSM. et al. (2019). Nat Commun. 10, 2137.

PMID: 31086181

Automated workflow composition in mass spectrometry-based proteomics.

Palmblad, M. et al. (2019). Bioinformatics. 35, 656 – 664.

PMID: 30060113

Special Issue on Software Tools and Resources: Acknowledging the Toolmakers of Science.

Weintraub, ST. et al. (2019). J Proteome Res. 18, 575.

PMID: 30704244

First Community-Wide, Comparative Cross-Linking Mass Spectrometry Study.

Lacobucci, C. et al. (2019). Anal Chem. 91, 6953-6961.

PMID: 31045356

Recommendations for performing, interpreting and reporting hydrogen deuterium exchange mass spectrometry (HDX-MS) experiments.

Masson, GR. et al. (2019). Nat Methods. 16, 595-602.

PMID: 31249422

PaDuA: A Python Library for High-Throughput (Phospho)proteomics Data Analysis.

Ressa, A. et al. (2019). J Proteome Res. 18, 576-584.

PMID: 30525654

Expanding the mass range for UVPD-based native top-down mass spectrometry.

Greisch, JF. et al. (2019). Chem Sci. 10, 7163-7171.

PMID: 31588283

Targeting proline in (phospho)proteomics.

van der Laarse, SAM. et al. (2019). FEBS J.

PMID: 31863553

NWO logoThis research was (partially) funded by NWO, project 184.034.019